ISDA: 8BE1

Deposition Date 2022-10-21

Release Date 2023-01-25

Last Version Date 2024-10-23

Entry Detail

PDB ID:

8BE1

Keywords:

IMMUNE SYSTEM

Title:

SARS-CoV-2 RBD in complex with a Fab fragment of a neutralising antibody mRBD2

Biological Source:

Source Organism:

Mus musculus (Taxon ID: 10090)
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.98 Å

R-Value Free:

0.28

R-Value Work:

0.24

R-Value Observed:

0.24

Space Group:

P 1 21 1

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:Antibody heavy chain
Chain IDs:A, D
Chain Length:230
Number of Molecules:2
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:Antibody light chain
Chain IDs:B, E
Chain Length:215
Number of Molecules:2
Biological Source:Mus musculus

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Spike protein S1
Gene (Uniprot):S
Chain IDs:C, F
Chain Length:198
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTC2 Pfam ID:PF09408

Ligand Molecules

SO4

Primary Citation

Microfluidics-enabled fluorescence-activated cell sorting of single pathogen-specific antibody secreting cells for the rapid discovery of monoclonal antibodies

Fischer, K, Lulla, A, So, T.Y, Pereyra-Gerber, P, Raybould, M.I.J, Kohler, T.N, Kaminski, T.S, Yam-Puc, J.C, Hughes, R, Leiss-Maier, F, Brear, P, Matheson, N.J, Deane, C.M, Hyvonen, M, Thaventhiran, J.E.D, Hollfelder, F.Show

Biorxiv ? ? ? (2023)

DOI: 10.1101/2023.01.10.523494

Primary Citation of related structures

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