8B6J image
Deposition Date 2022-09-27
Release Date 2023-03-29
Last Version Date 2023-04-12
Entry Detail
PDB ID:
8B6J
Title:
Cryo-EM structure of cytochrome bc1 complex (complex-III) from respiratory supercomplex of Tetrahymena thermophila
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Peptidase M16 inactive domain protein
Gene (Uniprot):TTHERM_00502380
Chain IDs:A, L (auth: a)
Chain Length:513
Number of Molecules:2
Biological Source:Tetrahymena thermophila SB210
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:M16 family peptidase, putative
Gene (Uniprot):TTHERM_00836690
Chain IDs:B, M (auth: b)
Chain Length:482
Number of Molecules:2
Biological Source:Tetrahymena thermophila SB210
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Apocytochrome b
Gene (Uniprot):cob
Chain IDs:C, N (auth: c)
Chain Length:426
Number of Molecules:2
Biological Source:Tetrahymena thermophila SB210
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytochrome protein c1
Gene (Uniprot):TTHERM_00918500
Chain IDs:D, O (auth: d)
Chain Length:319
Number of Molecules:2
Biological Source:Tetrahymena thermophila SB210
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Rieske iron-sulfur protein, ubiquinol-cytochrome C reductase iron-sulfur subunit
Gene (Uniprot):TTHERM_00295080
Chain IDs:E, P (auth: e)
Chain Length:269
Number of Molecules:2
Biological Source:Tetrahymena thermophila SB210
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ubiquinol-cytochrome C reductase hinge protein
Gene (Uniprot):TTHERM_00194690
Chain IDs:F, Q (auth: f)
Chain Length:86
Number of Molecules:2
Biological Source:Tetrahymena thermophila SB210
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:UQCRTT1
Gene (Uniprot):TTHERM_00382330
Chain IDs:G, R (auth: g)
Chain Length:328
Number of Molecules:2
Biological Source:Tetrahymena thermophila SB210
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Transmembrane protein, putative
Gene (Uniprot):TTHERM_00765330
Chain IDs:H, S (auth: h)
Chain Length:130
Number of Molecules:2
Biological Source:Tetrahymena thermophila SB210
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Transmembrane protein, putative
Gene (Uniprot):TTHERM_00456790
Chain IDs:I, T (auth: i)
Chain Length:119
Number of Molecules:2
Biological Source:Tetrahymena thermophila SB210
Polymer Type:polypeptide(L)
Molecule:UQCRTT3/UP1
Chain IDs:J, U (auth: j)
Chain Length:66
Number of Molecules:2
Biological Source:Tetrahymena thermophila SB210
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Transmembrane protein, putative
Gene (Uniprot):TTHERM_00218930
Chain IDs:K, V (auth: k)
Chain Length:62
Number of Molecules:2
Biological Source:Tetrahymena thermophila SB210
Polymer Type:polypeptide(L)
Molecule:UQCRTT2
Chain IDs:W (auth: l), X (auth: L)
Chain Length:41
Number of Molecules:2
Biological Source:Tetrahymena thermophila SB210
Primary Citation
Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature 615 934 938 (2023)
PMID: 36949187 DOI: 10.1038/s41586-023-05817-y

Abstact

Mitochondrial energy conversion requires an intricate architecture of the inner mitochondrial membrane1. Here we show that a supercomplex containing all four respiratory chain components contributes to membrane curvature induction in ciliates. We report cryo-electron microscopy and cryo-tomography structures of the supercomplex that comprises 150 different proteins and 311 bound lipids, forming a stable 5.8-MDa assembly. Owing to subunit acquisition and extension, complex I associates with a complex IV dimer, generating a wedge-shaped gap that serves as a binding site for complex II. Together with a tilted complex III dimer association, it results in a curved membrane region. Using molecular dynamics simulations, we demonstrate that the divergent supercomplex actively contributes to the membrane curvature induction and tubulation of cristae. Our findings highlight how the evolution of protein subunits of respiratory complexes has led to the I-II-III2-IV2 supercomplex that contributes to the shaping of the bioenergetic membrane, thereby enabling its functional specialization.

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