8B4Z image
Deposition Date 2022-09-21
Release Date 2023-02-22
Last Version Date 2025-07-09
Entry Detail
PDB ID:
8B4Z
Keywords:
Title:
Rosellinia necatrix megabirnavirus 1-W779 full capsid
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Major capsid protein A
Chain IDs:A, B
Chain Length:1240
Number of Molecules:2
Biological Source:Rosellinia necatrix megabirnavirus 1/W779
Ligand Molecules
Primary Citation
Capsid structure of a fungal dsRNA megabirnavirus reveals its previously unidentified surface architecture.
Plos Pathog. 19 e1011162 e1011162 (2023)
PMID: 36848381 DOI: 10.1371/journal.ppat.1011162

Abstact

Rosellinia necatrix megabirnavirus 1-W779 (RnMBV1) is a non-enveloped icosahedral double-stranded (ds)RNA virus that infects the ascomycete fungus Rosellinia necatrix, a causative agent that induces a lethal plant disease white root rot. Herein, we have first resolved the atomic structure of the RnMBV1 capsid at 3.2 Å resolution using cryo-electron microscopy (cryo-EM) single-particle analysis. Compared with other non-enveloped icosahedral dsRNA viruses, the RnMBV1 capsid protein structure exhibits an extra-long C-terminal arm and a surface protrusion domain. In addition, the previously unrecognized crown proteins are identified in a symmetry-expanded cryo-EM model and are present over the 3-fold axes. These exclusive structural features of the RnMBV1 capsid could have been acquired for playing essential roles in transmission and/or particle assembly of the megabirnaviruses. Our findings, therefore, will reinforce the understanding of how the structural and molecular machineries of the megabirnaviruses influence the virulence of the disease-related ascomycete fungus.

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Primary Citation of related structures