8B4H image
Entry Detail
PDB ID:
8B4H
EMDB ID:
Title:
IstA transposase cleaved donor complex
Biological Source:
PDB Version:
Deposition Date:
2022-09-20
Release Date:
2023-05-03
Method Details:
Experimental Method:
Resolution:
3.35 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Putative transposase for insertion sequence element IS5376
Chain IDs:A, B, C, D
Chain Length:406
Number of Molecules:4
Biological Source:Geobacillus stearothermophilus
Polymer Type:polydeoxyribonucleotide
Description:DNA (57-MER) / right IS21 transposon end (insertion sequence IS5376)
Chain IDs:E, G
Chain Length:60
Number of Molecules:2
Biological Source:Geobacillus stearothermophilus
Polymer Type:polydeoxyribonucleotide
Description:DNA (55-MER) / right IS21 transposon end (insertion sequence IS5376)
Chain IDs:F, H
Chain Length:55
Number of Molecules:2
Biological Source:Geobacillus stearothermophilus
Ligand Molecules
Primary Citation
IS21 family transposase cleaved donor complex traps two right-handed superhelical crossings.
Nat Commun 14 2335 2335 (2023)
PMID: 37087515 DOI: 10.1038/s41467-023-38071-x

Abstact

Transposases are ubiquitous enzymes that catalyze DNA rearrangement events with broad impacts on gene expression, genome evolution, and the spread of drug-resistance in bacteria. Here, we use biochemical and structural approaches to define the molecular determinants by which IstA, a transposase present in the widespread IS21 family of mobile elements, catalyzes efficient DNA transposition. Solution studies show that IstA engages the transposon terminal sequences to form a high-molecular weight complex and promote DNA integration. A 3.4 Å resolution structure of the transposase bound to transposon ends corroborates our biochemical findings and reveals that IstA self-assembles into a highly intertwined tetramer that synapses two supercoiled terminal inverted repeats. The three-dimensional organization of the IstA•DNA cleaved donor complex reveals remarkable similarities with retroviral integrases and classic transposase systems, such as Tn7 and bacteriophage Mu, and provides insights into IS21 transposition.

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Primary Citation of related structures