ISDA: 8B3I

Deposition Date 2022-09-16

Release Date 2023-09-27

Last Version Date 2025-07-09

Entry Detail

PDB ID:

8B3I

Keywords:

TRANSCRIPTION

Title:

CRL4CSA-E2-Ub (state 2)

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.50 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ubiquitin-conjugating enzyme E2 D2
Gene (Uniprot):UBE2D2
Chain IDs:A (auth: D)
Chain Length:1140
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62837 Pfam ID:PF00179 EC:2.3.2.23

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:NEDD8
Gene (Uniprot):NEDD8
Chain IDs:B (auth: N)
Chain Length:76
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q15843 Pfam ID:PF00240

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:E3 ubiquitin-protein ligase RBX1
Gene (Uniprot):RBX1
Chain IDs:C (auth: R)
Chain Length:108
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62877 Pfam ID:PF12678 EC:2.3.2.27

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ubiquitin
Gene (Uniprot):UBC
Chain IDs:D (auth: U)
Chain Length:76
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P0CG48 Pfam ID:PF00240

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:DNA excision repair protein ERCC-8
Gene (Uniprot):ERCC8
Chain IDs:E (auth: a)
Chain Length:396
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q13216 Pfam ID:PF00400

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:DNA damage-binding protein 1
Gene (Uniprot):DDB1
Chain IDs:F (auth: d)
Chain Length:1140
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q16531 Pfam ID:PF10433, PF03178

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cullin-4A
Gene (Uniprot):CUL4A
Chain IDs:G (auth: e)
Chain Length:759
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q13619 Pfam ID:PF00888, PF10557

Ligand Molecules

Primary Citation

C(N)RL4CSA-E2-Ub (state 2)

Kokic, G, Cramer, P.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

Feedback Form