8AWS image
Entry Detail
PDB ID:
8AWS
Keywords:
Title:
Millisecond cryo-trapping by the spitrobot crystal plunger, Xylose Isomerase with Glucose at 50ms
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2022-08-30
Release Date:
2023-05-24
Method Details:
Experimental Method:
Resolution:
2.26 Å
R-Value Free:
0.22
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Xylose isomerase
Chain IDs:A
Chain Length:388
Number of Molecules:1
Biological Source:Streptomyces rubiginosus
Primary Citation
Millisecond cryo-trapping by the spitrobot crystal plunger simplifies time-resolved crystallography.
Nat Commun 14 2365 2365 (2023)
PMID: 37185266 DOI: 10.1038/s41467-023-37834-w

Abstact

We introduce the spitrobot, a protein crystal plunger, enabling reaction quenching via cryo-trapping with a time-resolution in the millisecond range. Protein crystals are mounted on canonical micromeshes on an electropneumatic piston, where the crystals are kept in a humidity and temperature-controlled environment, then reactions are initiated via the liquid application method (LAMA) and plunging into liquid nitrogen is initiated after an electronically set delay time to cryo-trap intermediate states. High-magnification images are automatically recorded before and after droplet deposition, prior to plunging. The SPINE-standard sample holder is directly plunged into a storage puck, enabling compatibility with high-throughput infrastructure. Here we demonstrate binding of glucose and 2,3-butanediol in microcrystals of xylose isomerase, and of avibactam and ampicillin in microcrystals of the extended spectrum beta-lactamase CTX-M-14. We also trap reaction intermediates and conformational changes in macroscopic crystals of tryptophan synthase to demonstrate that the spitrobot enables insight into catalytic events.

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