8AVZ image
Deposition Date 2022-08-28
Release Date 2023-08-09
Last Version Date 2025-02-05
Entry Detail
PDB ID:
8AVZ
Keywords:
HYDROLASE
Title:
Crystal structure of PksD, the trans-acting acyl hydrolase domain from the bacillaene trans-AT PKS (SeMet derivative)
Biological Source:
Source Organism:
Bacillus subtilis subsp. subtilis str. 168 (Taxon ID: 224308)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.96 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
C 1 2 1
8AVZ validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Polyketide biosynthesis acyltransferase homolog PksD
Gene (Uniprot):pksD
Chain IDs:A, B, C, D
Chain Length:327
Number of Molecules:4
Biological Source:Bacillus subtilis subsp. subtilis str. 168
UniProt ID:O34877 Pfam ID:PF00698
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
ZN
Primary Citation
Molecular Basis for Short-Chain Thioester Hydrolysis by Acyl Hydrolases in trans-Acyltransferase Polyketide Synthases
Jacs Au ? ? ? (2025)
DOI: 10.1021/jacsau.4c00837
Primary Citation of related structures
8AW0