8AP0 image
Deposition Date 2022-08-09
Release Date 2022-09-07
Last Version Date 2024-02-07
Entry Detail
PDB ID:
8AP0
Title:
ForT Mutant T138V
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.20
R-Value Work:
0.15
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Beta-ribofuranosylaminobenzene 5'-phosphate synthase
Gene (Uniprot):cof6
Mutations:T138V
Chain IDs:A (auth: AAA)
Chain Length:341
Number of Molecules:1
Biological Source:Streptomyces kaniharaensis
Primary Citation
Experimental and computational snapshots of C-C bond formation in a C-nucleoside synthase.
Open Biology 13 220287 220287 (2023)
PMID: 36629016 DOI: 10.1098/rsob.220287

Abstact

The biosynthetic enzyme, ForT, catalyses the formation of a C-C bond between 4-amino-1H-pyrazoledicarboxylic acid and MgPRPP to produce a C-nucleoside precursor of formycin A. The transformation catalysed by ForT is of chemical interest because it is one of only a few examples in which C-C bond formation takes place via an electrophilic substitution of a small, aromatic heterocycle. In addition, ForT is capable of discriminating between the aminopyrazoledicarboxylic acid and an analogue in which the amine is replaced by a hydroxyl group; a remarkable feat given the steric and electronic similarities of the two molecules. Here we report biophysical measurements, structural biology and quantum chemical calculations that provide a detailed molecular picture of ForT-catalysed C-C bond formation and the conformational changes that are coupled to catalysis. Our findings set the scene for employing engineered ForT variants in the biocatalytic production of novel, anti-viral C-nucleoside and C-nucleotide analogues.

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Primary Citation of related structures