ISDA

Deposition Date 2022-08-04

Release Date 2022-08-24

Last Version Date 2024-07-24

Entry Detail

PDB ID:

8AMZ

Keywords:

PLANT PROTEIN

Title:

Spinach 19S proteasome

Biological Source:

Source Organism:

Spinacia oleracea (Taxon ID: 3562)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.30 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:26S proteasome regulatory subunit 7
Gene (Uniprot):RPT1
Chain IDs:A (auth: H)
Chain Length:426
Number of Molecules:1
Biological Source:Spinacia oleracea

UniProt ID:Q41365 Pfam ID:PF21236, PF00004, PF17862

Polymer Type:polypeptide(L)
Molecule:AAA domain-containing protein
Chain IDs:B (auth: I)
Chain Length:444
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:AAA domain-containing protein
Chain IDs:C (auth: J)
Chain Length:404
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:AAA domain-containing protein
Chain IDs:D (auth: K)
Chain Length:420
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:AAA domain-containing protein
Chain IDs:E (auth: L)
Chain Length:397
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:AAA domain-containing protein
Chain IDs:F (auth: M)
Chain Length:427
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:26S proteasome non-ATPase regulatory subunit 1 homolog
Chain IDs:P (auth: N)
Chain Length:1000
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:PCI domain-containing protein
Chain IDs:K (auth: O)
Chain Length:386
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:PCI domain-containing protein
Chain IDs:N (auth: P)
Chain Length:442
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:PCI domain-containing protein
Chain IDs:M (auth: Q)
Chain Length:421
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:PCI domain-containing protein
Chain IDs:Q (auth: R)
Chain Length:386
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:PCI domain-containing protein
Chain IDs:H (auth: S)
Chain Length:487
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:PCI domain-containing protein
Chain IDs:I (auth: T)
Chain Length:267
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:MPN domain-containing protein
Chain IDs:L (auth: U)
Chain Length:304
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:26S proteasome regulatory subunit RPN11
Chain IDs:G (auth: V)
Chain Length:309
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:VWFA domain-containing protein
Chain IDs:J (auth: W)
Chain Length:403
Number of Molecules:1
Biological Source:Spinacia oleracea

Polymer Type:polypeptide(L)
Molecule:26S proteasome non-ATPase regulatory subunit 2 homolog
Chain IDs:O (auth: Z)
Chain Length:895
Number of Molecules:1
Biological Source:Spinacia oleracea

Ligand Molecules

ADP

ATP

Primary Citation

Cryo-EM structure of the plant 26S proteasome

Kandolf, S, Grishkovskaya, I, Belacic, K, Foster, B, Imre, R, Bolhuis, D.L, Mechtler, K, Schleiffer, A, Tagare, H, Zhong, E.D, Meinhart, A, Brown, N.G, Haselbach, D.Show

Plant Communications 3 ? ? (2022)

Primary Citation of related structures