8AG0 image
Deposition Date 2022-07-18
Release Date 2022-11-23
Last Version Date 2024-11-13
Entry Detail
PDB ID:
8AG0
Keywords:
Title:
Crystal structure of mutant PRELID3a-TRIAP1 complex - R53E
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.30
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PRELI domain containing protein 3A
Gene (Uniprot):PRELID3A
Chain IDs:A
Chain Length:186
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Maltose/maltodextrin-binding periplasmic protein,TP53-regulated inhibitor of apoptosis 1
Gene (Uniprot):TRIAP1, malE
Chain IDs:B
Chain Length:446
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
An intermolecular hydrogen bonded network in the PRELID-TRIAP protein family plays a role in lipid sensing.
Biochim Biophys Acta Proteins Proteom 1871 140867 140867 (2022)
PMID: 36309326 DOI: 10.1016/j.bbapap.2022.140867

Abstact

The PRELID-TRIAP1 family of proteins is responsible for lipid transfer in mitochondria. Multiple structures have been resolved of apo and lipid substrate bound forms, allowing us to begin to piece together the molecular level details of the full lipid transfer cycle. Here, we used molecular dynamics simulations to demonstrate that the lipid binding is mediated by an extended, water-mediated hydrogen bonding network. A key mutation, R53E, was found to disrupt this network, causing lipid to be released from the complex. The X-ray crystal structure of R53E was captured in a fully closed and apo state. Lipid transfer assays and molecular simulations allow us to interpret the observed conformation in the context of the biological role. Together, our work provides further understanding of the mechanistic control of lipid transport by PRELID-TRIAP1 in mitochondria.

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