8AFV image
Entry Detail
PDB ID:
8AFV
Keywords:
Title:
DaArgC3 - Engineered Formyl Phosphate Reductase with 3 substitutions (S178V, G182V, L233I)
Biological Source:
PDB Version:
Deposition Date:
2022-07-18
Release Date:
2023-04-05
Method Details:
Experimental Method:
Resolution:
2.19 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:N-acetyl-gamma-glutamyl-phosphate reductase
Chain IDs:A, B, C, D
Chain Length:342
Number of Molecules:4
Biological Source:Denitrovibrio acetiphilus DSM 12809
Ligand Molecules
Primary Citation
Engineering a new-to-nature cascade for phosphate-dependent formate to formaldehyde conversion in vitro and in vivo.
Nat Commun 14 2682 2682 (2023)
PMID: 37160875 DOI: 10.1038/s41467-023-38072-w

Abstact

Formate can be envisioned at the core of a carbon-neutral bioeconomy, where it is produced from CO2 by (electro-)chemical means and converted into value-added products by enzymatic cascades or engineered microbes. A key step in expanding synthetic formate assimilation is its thermodynamically challenging reduction to formaldehyde. Here, we develop a two-enzyme route in which formate is activated to formyl phosphate and subsequently reduced to formaldehyde. Exploiting the promiscuity of acetate kinase and N-acetyl-γ-glutamyl phosphate reductase, we demonstrate this phosphate (Pi)-based route in vitro and in vivo. We further engineer a formyl phosphate reductase variant with improved formyl phosphate conversion in vivo by suppressing cross-talk with native metabolism and interface the Pi route with a recently developed formaldehyde assimilation pathway to enable C2 compound formation from formate as the sole carbon source in Escherichia coli. The Pi route therefore offers a potent tool in expanding the landscape of synthetic formate assimilation.

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Primary Citation of related structures