8AFA image
Deposition Date 2022-07-16
Release Date 2023-04-05
Last Version Date 2024-07-24
Entry Detail
PDB ID:
8AFA
Title:
Cryo-EM structure of a substrate-bound glutamate transporter homologue GltTk encapsulated within a nanodisc
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.25 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Proton/glutamate symporter, SDF family
Gene (Uniprot):TK0986
Mutagens:P208R
Chain IDs:A, B, C
Chain Length:438
Number of Molecules:3
Biological Source:Thermococcus kodakarensis
Ligand Molecules
Primary Citation
Mutation in glutamate transporter homologue GltTk provides insights into pathologic mechanism of episodic ataxia 6.
Nat Commun 14 1799 1799 (2023)
PMID: 37002226 DOI: 10.1038/s41467-023-37503-y

Abstact

Episodic ataxias (EAs) are rare neurological conditions affecting the nervous system and typically leading to motor impairment. EA6 is linked to the mutation of a highly conserved proline into an arginine in the glutamate transporter EAAT1. In vitro studies showed that this mutation leads to a reduction in the substrates transport and an increase in the anion conductance. It was hypothesised that the structural basis of these opposed functional effects might be the straightening of transmembrane helix 5, which is kinked in the wild-type protein. In this study, we present the functional and structural implications of the mutation P208R in the archaeal homologue of glutamate transporters GltTk. We show that also in GltTk the P208R mutation leads to reduced aspartate transport activity and increased anion conductance, however a cryo-EM structure reveals that the kink is preserved. The arginine side chain of the mutant points towards the lipidic environment, where it may engage in interactions with the phospholipids, thereby potentially interfering with the transport cycle and contributing to stabilisation of an anion conducting state.

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Disease

Primary Citation of related structures