8A2J image
Entry Detail
PDB ID:
8A2J
Keywords:
Title:
human STING in complex with 2'-3'-cyclic-GMP-7-deaza(4-biphenylyl)-AMP
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-06-03
Release Date:
2022-10-12
Method Details:
Experimental Method:
Resolution:
2.32 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Stimulator of interferon genes protein
Chain IDs:A, B
Chain Length:241
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Design, Synthesis, and Biochemical and Biological Evaluation of Novel 7-Deazapurine Cyclic Dinucleotide Analogues as STING Receptor Agonists.
J.Med.Chem. 65 14082 14103 (2022)
PMID: 36201304 DOI: 10.1021/acs.jmedchem.2c01305

Abstact

Cyclic dinucleotides (CDNs) are second messengers that activate stimulator of interferon genes (STING). The cGAS-STING pathway plays a promising role in cancer immunotherapy. Here, we describe the synthesis of CDNs containing 7-substituted 7-deazapurine moiety. We used mouse cyclic GMP-AMP synthase and bacterial dinucleotide synthases for the enzymatic synthesis of CDNs. Alternatively, 7-(het)aryl 7-deazapurine CDNs were prepared by Suzuki-Miyaura cross-couplings. New CDNs were tested in biochemical and cell-based assays for their affinity to human STING. Eight CDNs showed better activity than 2'3'-cGAMP, the natural ligand of STING. The effect on cytokine and chemokine induction was also evaluated. The best activities were observed for CDNs bearing large aromatic substituents that point above the CDN molecule. We solved four X-ray structures of complexes of new CDNs with human STING. We observed π-π stacking interactions between the aromatic substituents and Tyr240 that are involved in the stabilization of CDN-STING complexes.

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