7ZVM image
Deposition Date 2022-05-16
Release Date 2022-08-24
Last Version Date 2024-05-01
Entry Detail
PDB ID:
7ZVM
Keywords:
Title:
Thermococcus barophilus phosphomannose isomerase protein structure at 1.6 A
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.58 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Mannose-6-phosphate isomerase
Gene (Uniprot):TERMP_00744
Chain IDs:A
Chain Length:113
Number of Molecules:1
Biological Source:Thermococcus barophilus
Ligand Molecules
Primary Citation
Unravelling the Adaptation Mechanisms to High Pressure in Proteins.
Int J Mol Sci 23 ? ? (2022)
PMID: 35955607 DOI: 10.3390/ijms23158469

Abstact

Life is thought to have appeared in the depth of the sea under high hydrostatic pressure. Nowadays, it is known that the deep biosphere hosts a myriad of life forms thriving under high-pressure conditions. However, the evolutionary mechanisms leading to their adaptation are still not known. Here, we show the molecular bases of these mechanisms through a joint structural and dynamical study of two orthologous proteins. We observed that pressure adaptation involves the decoupling of protein-water dynamics and the elimination of cavities in the protein core. This is achieved by rearranging the charged residues on the protein surface and using bulkier hydrophobic residues in the core. These findings will be the starting point in the search for a complete genomic model explaining high-pressure adaptation.

Legend

Protein

Chemical

Disease

Primary Citation of related structures