7ZV2 image
Entry Detail
PDB ID:
7ZV2
Keywords:
Title:
HUMAN PRMT5:MEP50 Crystal Structure With MTA and Fragment Bound
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-05-13
Release Date:
2022-10-19
Method Details:
Experimental Method:
Resolution:
2.01 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Protein arginine N-methyltransferase 5
Chain IDs:A
Chain Length:645
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Methylosome protein 50
Chain IDs:B
Chain Length:350
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Fragment optimization and elaboration strategies - the discovery of two lead series of PRMT5/MTA inhibitors from five fragment hits.
Rsc Med Chem 13 1549 1564 (2022)
PMID: 36545438 DOI: 10.1039/d2md00163b

Abstact

Here we describe the early stages of a fragment-based lead discovery (FBLD) project for a recently elucidated synthetic lethal target, the PRMT5/MTA complex, for the treatment of MTAP-deleted cancers. Starting with five fragment/PRMT5/MTA X-ray co-crystal structures, we employed a two-phase fragment elaboration process encompassing optimization of fragment hits and subsequent fragment growth to increase potency, assess synthetic tractability, and enable structure-based drug design. Two lead series were identified, one of which led to the discovery of the clinical candidate MRTX1719.

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Primary Citation of related structures