ISDA

Deposition Date 2022-04-07

Release Date 2023-06-14

Last Version Date 2024-06-19

Entry Detail

PDB ID:

7ZIE

Keywords:

DNA BINDING PROTEIN

Title:

Gcf1p, multimerizes and bridges the mitochondrial DNA from Candida albicans by a specific mechanism.

Biological Source:

Source Organism:

Candida albicans (Taxon ID: 5476)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION, SOLUTION SCATTERING

Resolution:

2.90 Å

R-Value Free:

0.26

R-Value Work:

0.21

R-Value Observed:

0.21

Space Group:

P 2 21 21

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Gcf1p
Gene (Uniprot):GCF1
Chain IDs:A, B
Chain Length:245
Number of Molecules:2
Biological Source:Candida albicans

UniProt ID:Q59QB8

Polymer Type:polydeoxyribonucleotide
Molecule:20-mer DNA
Chain IDs:C (auth: W), E (auth: Y)
Chain Length:20
Number of Molecules:2
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:20-mer DNA
Chain IDs:D (auth: X), F (auth: Z)
Chain Length:20
Number of Molecules:2
Biological Source:synthetic construct

Ligand Molecules

GOL

Primary Citation

Gcf1p tetramerizes upon DNA binding, revealing a novel compaction method for mitochondrial DNA in Candida albicans.

Tarres-Sole, A, Ruiz-Lopez, E, Lyonnais, S, Sola, M, Afonine, P.V, Grosse-Kunstleve, R.W, Echols, N, Headd, J.J, Moriarty, N.W, Mustyakimov, M, Terwilliger, T.C, Urzhumtsev, A, Zwart, P.H, Adams, P.D, Liebschner, D, Afonine, P.V, Baker, M.L, Bunkoczi, G, Chen, V.B, Croll, T.I, Hintze, B, Hung, L.W, Jain, S, McCoy, A.J, Moriarty, N.W, Oeffner, R.D, Poon, B.K, Prisant, M.G, Read, R.J, Richardson, J.S, Richardson, D.C, Sammito, M.D, Sobolev, O.V, Stockwell, D.H, Terwilliger, T.C, Urzhumtsev, A.G, Videau, L.L, Williams, C.J, Adams, P.D.Show

Nucleic Acids Res. ? ? ? (2023)

DOI: 10.1093/nar/gkad39

Primary Citation of related structures