7ZBN image
Deposition Date 2022-03-23
Release Date 2022-06-22
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7ZBN
Keywords:
Title:
Cryo-EM structure of the human GS-GN complex in the inhibited state
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.62 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Glycogen [starch] synthase, muscle
Gene (Uniprot):GYS1
Chain IDs:A, E (auth: C)
Chain Length:737
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Glycogen [starch] synthase, muscle
Gene (Uniprot):GYS1
Chain IDs:B, F (auth: D)
Chain Length:737
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Isoform GN-1 of Glycogenin-1
Gene (Uniprot):GYG1
Chain IDs:C (auth: E), D (auth: F), G, H
Chain Length:333
Number of Molecules:4
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SEP B SER modified residue
Ligand Molecules
Primary Citation
Mechanism of glycogen synthase inactivation and interaction with glycogenin.
Nat Commun 13 3372 3372 (2022)
PMID: 35690592 DOI: 10.1038/s41467-022-31109-6

Abstact

Glycogen is the major glucose reserve in eukaryotes, and defects in glycogen metabolism and structure lead to disease. Glycogenesis involves interaction of glycogenin (GN) with glycogen synthase (GS), where GS is activated by glucose-6-phosphate (G6P) and inactivated by phosphorylation. We describe the 2.6 Å resolution cryo-EM structure of phosphorylated human GS revealing an autoinhibited GS tetramer flanked by two GN dimers. Phosphorylated N- and C-termini from two GS protomers converge near the G6P-binding pocket and buttress against GS regulatory helices. This keeps GS in an inactive conformation mediated by phospho-Ser641 interactions with a composite "arginine cradle". Structure-guided mutagenesis perturbing interactions with phosphorylated tails led to increased basal/unstimulated GS activity. We propose that multivalent phosphorylation supports GS autoinhibition through interactions from a dynamic "spike" region, allowing a tuneable rheostat for regulating GS activity. This work therefore provides insights into glycogen synthesis regulation and facilitates studies of glycogen-related diseases.

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Protein

Chemical

Disease

Primary Citation of related structures