7Z6M image
Deposition Date 2022-03-13
Release Date 2022-08-10
Last Version Date 2024-01-31
Entry Detail
PDB ID:
7Z6M
Title:
Crystal structure of Zn2+-transporter BbZIP in a cadmium bound state
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.51 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Putative membrane protein
Gene (Uniprot):BB2405
Chain IDs:A
Chain Length:329
Number of Molecules:1
Biological Source:Bordetella bronchiseptica
Ligand Molecules
Primary Citation
The two-domain elevator-type mechanism of zinc-transporting ZIP proteins.
Sci Adv 8 eabn4331 eabn4331 (2022)
PMID: 35857505 DOI: 10.1126/sciadv.abn4331

Abstact

Zinc is essential for all organisms and yet detrimental at elevated levels. Hence, homeostasis of this metal is tightly regulated. The Zrt/Irt-like proteins (ZIPs) represent the only zinc importers in metazoans. Mutations in human ZIPs cause serious disorders, but the mechanism by which ZIPs transfer zinc remains elusive. Hitherto, structural information is only available for a model member, BbZIP, and as a single, ion-bound conformation, precluding mechanistic insights. Here, we elucidate an inward-open metal-free BbZIP structure, differing substantially in the relative positions of the two separate domains of ZIPs. With accompanying coevolutional analyses, mutagenesis, and uptake assays, the data point to an elevator-type transport mechanism, likely shared within the ZIP family, unifying earlier functional data. Moreover, the structure reveals a previously unknown ninth transmembrane segment that is important for activity in vivo. Our findings outline the mechanistic principles governing ZIP-protein transport and enhance the molecular understanding of ZIP-related disorders.

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Primary Citation of related structures