7Z21 image
Deposition Date 2022-02-25
Release Date 2022-08-24
Last Version Date 2024-01-31
Entry Detail
PDB ID:
7Z21
Keywords:
Title:
BAF A12T bound to the lamin A/C Ig-fold domain
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.63 Å
R-Value Free:
0.30
R-Value Work:
0.26
R-Value Observed:
0.27
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Barrier-to-autointegration factor, N-terminally processed
Gene (Uniprot):BANF1
Mutagens:A12T
Chain IDs:A, B, C, D
Chain Length:89
Number of Molecules:4
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lamin-A/C
Gene (Uniprot):LMNA
Chain IDs:E, F
Chain Length:156
Number of Molecules:2
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSX E CYS modified residue
Ligand Molecules
Primary Citation
The BAF A12T mutation disrupts lamin A/C interaction, impairing robust repair of nuclear envelope ruptures in Nestor-Guillermo progeria syndrome cells.
Nucleic Acids Res. 50 9260 9278 (2022)
PMID: 36039758 DOI: 10.1093/nar/gkac726

Abstact

Nestor-Guillermo progeria syndrome (NGPS) is caused by a homozygous alanine-to-threonine mutation at position 12 (A12T) in barrier-to-autointegration factor (BAF). It is characterized by accelerated aging with severe skeletal abnormalities. BAF is an essential protein binding to DNA and nuclear envelope (NE) proteins, involved in NE rupture repair. Here, we assessed the impact of BAF A12T on NE integrity using NGPS-derived patient fibroblasts. We observed a strong defect in lamin A/C accumulation to NE ruptures in NGPS cells, restored upon homozygous reversion of the pathogenic BAF A12T mutation with CRISPR/Cas9. By combining in vitro and cellular assays, we demonstrated that while the A12T mutation does not affect BAF 3D structure and phosphorylation by VRK1, it specifically decreases the interaction between BAF and lamin A/C. Finally, we revealed that the disrupted interaction does not prevent repair of NE ruptures but instead generates weak points in the NE that lead to a higher frequency of NE re-rupturing in NGPS cells. We propose that this NE fragility could directly contribute to the premature aging phenotype in patients.

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Protein

Chemical

Disease

Primary Citation of related structures
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