7Z1Z image
Deposition Date 2022-02-25
Release Date 2022-05-11
Last Version Date 2024-07-17
Entry Detail
PDB ID:
7Z1Z
Keywords:
VIRAL PROTEIN
Title:
MVV strand transfer complex (STC) intasome in complex with LEDGF/p75 at 3.5 A resolution
Biological Source:
Source Organism:
Visna/maedi virus EV1 KV1772 (Taxon ID: 36374)
Homo sapiens (Taxon ID: 9606)
DNA molecule (Taxon ID: 2853804)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
7Z1Z validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pol polyprotein
Gene (Uniprot):pol
Chain IDs:A, B, C, D, E, F, G, H, N (auth: I), O (auth: J), P (auth: K), Q (auth: L), R (auth: M), S (auth: N), T (auth: O), U (auth: P)
Chain Length:281
Number of Molecules:16
Biological Source:Visna/maedi virus EV1 KV1772
UniProt ID:P35956 Pfam ID:PF02022, PF00665
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PC4 and SFRS1-interacting protein
Gene (Uniprot):PSIP1
Chain IDs:I (auth: R), J (auth: Q)
Chain Length:95
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:O75475 Pfam ID:PF11467
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*TP*TP*GP*AP*TP*TP*AP*GP*GP*GP*TP*G)-3')
Chain IDs:M (auth: U), X (auth: a)
Chain Length:281
Number of Molecules:2
Biological Source:DNA molecule
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (37-MER)
Chain IDs:L (auth: W), W (auth: Z)
Chain Length:50
Number of Molecules:2
Biological Source:DNA molecule
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*GP*CP*TP*GP*CP*GP*AP*GP*AP*TP*CP*CP*GP*CP*TP*CP*CP*GP*GP*TP*G)-3')
Chain IDs:K (auth: X), V (auth: Y)
Chain Length:23
Number of Molecules:2
Biological Source:DNA molecule
Ligand Molecules
ZN
Primary Citation
Multivalent interactions essential for lentiviral integrase function.
Nat Commun 13 2416 ? (2022)
DOI: 10.1038/s41467-022-29928-8
Primary Citation of related structures
7Z1Z