7Z14 image
Deposition Date 2022-02-24
Release Date 2022-08-17
Last Version Date 2024-11-06
Entry Detail
PDB ID:
7Z14
Title:
Cryo-EM structure of Torpedo nicotinic acetylcholine receptor in complex with a short-chain neurotoxin.
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.15 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Acetylcholine receptor subunit alpha
Gene (Uniprot):CHRNA1
Chain IDs:A, D
Chain Length:437
Number of Molecules:2
Biological Source:Tetronarce californica
Polymer Type:polypeptide(L)
Molecule:Acetylcholine receptor subunit beta
Gene (Uniprot):CHRNB1
Chain IDs:B
Chain Length:469
Number of Molecules:1
Biological Source:Tetronarce californica
Polymer Type:polypeptide(L)
Molecule:Acetylcholine receptor subunit delta
Gene (Uniprot):chrnd
Chain IDs:C
Chain Length:501
Number of Molecules:1
Biological Source:Tetronarce californica
Polymer Type:polypeptide(L)
Molecule:Acetylcholine receptor subunit gamma
Gene (Uniprot):CHRNG
Chain IDs:E
Chain Length:489
Number of Molecules:1
Biological Source:Tetronarce californica
Polymer Type:polypeptide(L)
Molecule:Consensus short-chain short-chain alpha-neurotoxin ScNtx
Chain IDs:F, G
Chain Length:60
Number of Molecules:2
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
The molecular mechanism of snake short-chain alpha-neurotoxin binding to muscle-type nicotinic acetylcholine receptors.
Nat Commun 13 4543 4543 (2022)
PMID: 35927270 DOI: 10.1038/s41467-022-32174-7

Abstact

Bites by elapid snakes (e.g. cobras) can result in life-threatening paralysis caused by venom neurotoxins blocking neuromuscular nicotinic acetylcholine receptors. Here, we determine the cryo-EM structure of the muscle-type Torpedo receptor in complex with ScNtx, a recombinant short-chain α-neurotoxin. ScNtx is pinched between loop C on the principal subunit and a unique hairpin in loop F on the complementary subunit, thereby blocking access to the neurotransmitter binding site. ScNtx adopts a binding mode that is tilted toward the complementary subunit, forming a wider network of interactions than those seen in the long-chain α-Bungarotoxin complex. Certain mutations in ScNtx at the toxin-receptor interface eliminate inhibition of neuronal α7 nAChRs, but not of human muscle-type receptors. These observations explain why ScNtx binds more tightly to muscle-type receptors than neuronal receptors. Together, these data offer a framework for understanding subtype-specific actions of short-chain α-neurotoxins and inspire strategies for design of new snake antivenoms.

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Primary Citation of related structures