7YYH image
Deposition Date 2022-02-17
Release Date 2022-05-18
Last Version Date 2024-07-17
Entry Detail
PDB ID:
7YYH
Keywords:
Title:
Structure of the human CCANdeltaT CENP-A alpha-satellite complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
8.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H3-like centromeric protein A
Gene (Uniprot):CENPA
Chain IDs:A, E
Chain Length:140
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H4
Gene (Uniprot):H4C1, H4C2, H4C3, H4C4, H4C5, H4C6, H4C8, H4C9, H4C11, H4C12, H4C13, H4C14, H4C15, H4C16
Chain IDs:B, F
Chain Length:103
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H2A type 1-C
Gene (Uniprot):H2AC6
Chain IDs:C, G
Chain Length:130
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H2B type 1-C/E/F/G/I
Gene (Uniprot):H2BC4, H2BC6, H2BC7, H2BC8, H2BC10
Chain IDs:D, T (auth: h)
Chain Length:126
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centromere protein H
Gene (Uniprot):CENPH
Chain IDs:H
Chain Length:247
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centromere protein I
Gene (Uniprot):CENPI
Chain IDs:I
Chain Length:756
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (171-MER)
Chain IDs:J
Chain Length:171
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centromere protein K
Gene (Uniprot):CENPK
Chain IDs:K
Chain Length:269
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centromere protein L
Gene (Uniprot):CENPL
Chain IDs:L
Chain Length:544
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centromere protein M
Gene (Uniprot):CENPM
Chain IDs:M
Chain Length:180
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centromere protein N
Gene (Uniprot):CENPN
Chain IDs:N
Chain Length:339
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centromere protein O
Gene (Uniprot):CENPO
Chain IDs:O
Chain Length:300
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centromere protein P
Gene (Uniprot):CENPP
Chain IDs:P
Chain Length:288
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centromere protein Q
Gene (Uniprot):CENPQ
Chain IDs:Q
Chain Length:268
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centromere protein R
Gene (Uniprot):ITGB3BP
Chain IDs:R
Chain Length:177
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centromere protein U
Gene (Uniprot):CENPU
Chain IDs:S (auth: U)
Chain Length:418
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (171-MER)
Chain IDs:W (auth: i)
Chain Length:756
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centromere protein C
Gene (Uniprot):CENPC
Chain IDs:U (auth: k), V (auth: l)
Chain Length:269
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure of the human inner kinetochore bound to a centromeric CENP-A nucleosome.
Science 376 844 852 (2022)
PMID: 35420891 DOI: 10.1126/science.abn3810

Abstact

Kinetochores assemble onto specialized centromeric CENP-A (centromere protein A) nucleosomes (CENP-ANuc) to mediate attachments between chromosomes and the mitotic spindle. We describe cryo-electron microscopy structures of the human inner kinetochore constitutive centromere associated network (CCAN) complex bound to CENP-ANuc reconstituted onto α-satellite DNA. CCAN forms edge-on contacts with CENP-ANuc, and a linker DNA segment of the α-satellite repeat emerges from the fully wrapped end of the nucleosome to thread through the central CENP-LN channel that tightly grips the DNA. The CENP-TWSX histone-fold module further augments DNA binding and partially wraps the linker DNA in a manner reminiscent of canonical nucleosomes. Our study suggests that the topological entrapment of the linker DNA by CCAN provides a robust mechanism by which kinetochores withstand both pushing and pulling forces exerted by the mitotic spindle.

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