7YWE image
Entry Detail
PDB ID:
7YWE
Keywords:
Title:
Monocot chimeric jacalin JAC1 from Oryza sativa: dirigent domain (crystal form 2)
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2022-02-13
Release Date:
2022-05-04
Method Details:
Experimental Method:
Resolution:
2.15 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
H 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Dirigent protein
Chain IDs:A, B, C
Chain Length:161
Number of Molecules:3
Biological Source:Oryza sativa
Primary Citation
The Crystal Structure of the Defense Conferring Rice Protein Os JAC1 Reveals a Carbohydrate Binding Site on the Dirigent-like Domain.
Biomolecules 12 ? ? (2022)
PMID: 36009020 DOI: 10.3390/biom12081126

Abstact

Pesticides are routinely used to prevent severe losses in agriculture. This practice is under debate because of its potential negative environmental impact and selection of resistances in pathogens. Therefore, the development of disease resistant plants is mandatory. It was shown that the rice (Oryza sativa) protein OsJAC1 enhances resistance against different bacterial and fungal plant pathogens in rice, barley, and wheat. Recently we reported possible carbohydrate interaction partners for both domains of OsJAC1 (a jacalin-related lectin (JRL) and a dirigent (DIR) domain), however, a mechanistic understanding of its function is still lacking. Here, we report crystal structures for both individual domains and the complex of galactobiose with the DIR domain, which revealed a new carbohydrate binding motif for DIR proteins. Docking studies of the two domains led to a model of the full-length protein. Our findings offer insights into structure and binding properties of OsJAC1 and its possible function in pathogen resistance.

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Primary Citation of related structures