7YI6 image
Deposition Date 2022-07-15
Release Date 2023-08-30
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7YI6
Keywords:
ANTIVIRAL PROTEIN/IMMUNE SYSTEM
Title:
bnAb 3D1 in complex with 6-mer HR1 peptide from HCoV-229E S protein
Biological Source:
Source Organism:
Human coronavirus 229E (Taxon ID: 11137)
Homo sapiens (Taxon ID: 9606)
Host Organism:
chemical production metagenome
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.28 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
7YI6 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Chain IDs:A, D (auth: C)
Chain Length:7
Number of Molecules:2
Biological Source:Human coronavirus 229E
UniProt ID:P15423
Polymer Type:polypeptide(L)
Molecule:light chain of 3D1
Chain IDs:B, E
Chain Length:214
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:heavy chain of 3D1
Chain IDs:C (auth: D), F
Chain Length:221
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
CL
EDO
PEG
Primary Citation
Cross-reactive epitopes between HIV and Coronavirus revealed by 3D1
To Be Published ? ? ? (?)
Primary Citation of related structures
7YI6