7YH5 image
Entry Detail
PDB ID:
7YH5
Keywords:
Title:
MazG(Mycobacterium tuberculosis)
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2022-07-12
Release Date:
2023-07-19
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.29
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 4 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Nucleoside triphosphate pyrophosphohydrolase
Chain IDs:A, B, C, D, E, F
Chain Length:185
Number of Molecules:6
Biological Source:Mycobacterium tuberculosis
Ligand Molecules
Primary Citation
Structural analysis of the housecleaning nucleoside triphosphate pyrophosphohydrolase MazG from Mycobacterium tuberculosis.
Front Microbiol 14 1137279 1137279 (2023)
PMID: 36937295 DOI: 10.3389/fmicb.2023.1137279

Abstact

The housecleaning enzyme of Mycobacterium tuberculosis (Mtb), MazG, is a nucleoside triphosphate pyrophosphohydrolase (NTP-PPase) and can hydrolyze all canonical or non-canonical NTPs into NMPs and pyrophosphate. The Mycobacterium tuberculosis MazG (Mtb-MazG) contributes to antibiotic resistance in response to oxidative or nitrosative stress under dormancy, making it a promising target for treating TB in latent infection patients. However, the structural basis of Mtb-MazG is not clear. Here we describe the crystal structure of Mtb-MazG (1-185) at 2.7 Å resolution, composed of two similar folded spherical domains in tandem. Unlike other all-α NTP pyrophosphatases, Mtb-MazG has an N-terminal extra region composed of three α-helices and five β-strands. The second domain is global, with five α-helices located in the N-terminal domain. Gel-filtration assay and SAXS analysis show that Mtb-MazG forms an enzyme-active dimer in solution. In addition, the metal ion Mg2+ is bound with four negative-charged residues Glu119, Glu122, Glu138, and Asp141. Different truncations and site-directed mutagenesis revealed that the full-length dimeric form and the metal ion Mg2+ are indispensable for the catalytic activity of Mtb-MazG. Thus, our work provides new insights into understanding the molecular basis of Mtb-MazG.

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Primary Citation of related structures