7YFC image
Entry Detail
PDB ID:
7YFC
EMDB ID:
Title:
Cryo-EM structure of the histamine-bound histamine H4 receptor and Gq complex
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2022-07-08
Release Date:
2023-10-25
Method Details:
Experimental Method:
Resolution:
3.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Engineered G-alpha-q
Chain IDs:A
Chain Length:361
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Chain IDs:B
Chain Length:388
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:scFv16
Chain IDs:C
Chain Length:259
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Chain IDs:D (auth: G)
Chain Length:71
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Nb35
Chain IDs:E (auth: N)
Chain Length:129
Number of Molecules:1
Biological Source:Lama glama
Polymer Type:polypeptide(L)
Description:Histamine H4 receptor
Chain IDs:F (auth: R)
Chain Length:548
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural insights into the agonists binding and receptor selectivity of human histamine H 4 receptor.
Nat Commun 14 6538 6538 (2023)
PMID: 37863901 DOI: 10.1038/s41467-023-42260-z

Abstact

Histamine is a biogenic amine that participates in allergic and inflammatory processes by stimulating histamine receptors. The histamine H4 receptor (H4R) is a potential therapeutic target for chronic inflammatory diseases such as asthma and atopic dermatitis. Here, we show the cryo-electron microscopy structures of the H4R-Gq complex bound with an endogenous agonist histamine or the selective agonist imetit bound in the orthosteric binding pocket. The structures demonstrate binding mode of histamine agonists and that the subtype-selective agonist binding causes conformational changes in Phe3447.39, which, in turn, form the "aromatic slot". The results provide insights into the molecular underpinnings of the agonism of H4R and subtype selectivity of histamine receptors, and show that the H4R structures may be valuable in rational drug design of drugs targeting the H4R.

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Primary Citation of related structures