7YEQ image
Deposition Date 2022-07-06
Release Date 2023-07-26
Last Version Date 2025-02-26
Entry Detail
PDB ID:
7YEQ
Keywords:
Title:
Structural insight into African Swine Fever Virus CP312R protein reveals it as a single-stranded DNA binding protein
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.32 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CP312R
Gene (Uniprot):CP312R CDS
Chain IDs:A
Chain Length:307
Number of Molecules:1
Biological Source:African swine fever virus
Primary Citation
Structural insights into the CP312R protein of the African swine fever virus.
Biochem.Biophys.Res.Commun. 624 68 74 (2022)
PMID: 35933928 DOI: 10.1016/j.bbrc.2022.07.091

Abstact

African swine fever (ASF) is a lethal hemorrhagic disease that affects domestic pigs and wild boars. There is no medication available for ASF to date. The ability to mount antigen-specific responses to viral vectored CP312R makes it a crucial potential target for designing vaccines or drugs. This study determined the crystal structure of ASFV CP312R at 2.32 Å and found it to be a monomer with a single-stranded DNA binding core domain with a clear five-strands β-barrel OB-fold architecture. Electrophoretic mobility shift assay and size-exclusion chromatography characterization assay further confirmed the single-stranded DNA (ssDNA)-binding property of ASFV CP312R. This study revealed the structure and preliminary ssDNA interaction mechanisms of ASFV CP312R, providing new clues for developing new antiviral strategies.

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Primary Citation of related structures