7YD1 image
Entry Detail
PDB ID:
7YD1
EMDB ID:
EMD-33745
Keywords:
VIRAL PROTEIN
Title:
Local refinement of SARS-CoV-2 Omicron S trimer complexed with XG005
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus 2, Homo sapiens
Host Organism:
Homo sapiens
PDB Version:
Deposition Date:
2022-07-02
Release Date:
2023-07-12
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.99 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
7YD1 validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:XG005-VH
Chain IDs:B (auth: A)
Chain Length:122
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:XG005-VL
Chain IDs:C (auth: B)
Chain Length:108
Number of Molecules:1
Biological Source:Homo sapiens
Protein Blast
Polymer Type:polypeptide(L)
Description:Spike protein S1
Chain IDs:A (auth: C)
Chain Length:198
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTC2 Pfam ID:PF09408
Ligand Molecules
NA
Primary Citation
OS-XG005
To be Published ? ? ? (?)
Primary Citation of related structures
7YD1