7YD0 image
Deposition Date 2022-07-02
Release Date 2023-12-13
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7YD0
Keywords:
VIRAL PROTEIN
Title:
SARS-CoV-2 Omicron 1-RBD up spike trimer complexed with two XG005 Fab
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus (Taxon ID: 2901879)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.58 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
7YD0 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Chain IDs:A, B, C
Chain Length:1285
Number of Molecules:3
Biological Source:Severe acute respiratory syndrome coronavirus
UniProt ID:P0DTC2 Pfam ID:PF16451, PF09408, PF19209, PF01601
Polymer Type:polypeptide(L)
Molecule:XG005-VH
Chain IDs:D, F
Chain Length:223
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:XG005-VL
Chain IDs:E, G
Chain Length:205
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
NA
Primary Citation
SARS-CoV-2 Omicron 1-RBD up spike trimer complexed with two XG005 Fab
To be Published ? ? ? (?)
Primary Citation of related structures
7YD0
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