7YBB image
Deposition Date 2022-06-29
Release Date 2023-07-05
Last Version Date 2024-10-23
Entry Detail
PDB ID:
7YBB
Keywords:
OXIDOREDUCTASE
Title:
Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with D-4-hydroxy-2-oxoglutarate and factor X-derived peptide (39mer-4Ser)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.68 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
7YBB validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Aspartyl/asparaginyl beta-hydroxylase
Gene (Uniprot):ASPH
Chain IDs:A
Chain Length:429
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q12797 Pfam ID:PF13432, PF05118 EC:1.14.11.16
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Coagulation factor X
Gene (Uniprot):F10
Chain IDs:B
Chain Length:39
Number of Molecules:1
Biological Source:synthetic construct
UniProt ID:P00742 Pfam ID:PF00008 EC:3.4.21.6
Ligand Molecules
IO9
MN
Primary Citation
Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with D-4-hydroxy-2-oxoglutarate and factor X-derived peptide (39mer-4Ser)
To Be Published ? ? ? (?)
Primary Citation of related structures
7YBB