7Y45 image
Entry Detail
PDB ID:
7Y45
EMDB ID:
Title:
Cryo-EM structure of the Na+,K+-ATPase in the E2.2K+ state
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2022-06-14
Release Date:
2022-07-13
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Na, K-ATPase alpha subunit
Chain IDs:A (auth: C), D (auth: A)
Chain Length:1028
Number of Molecules:2
Biological Source:Squalus acanthias
Polymer Type:polypeptide(L)
Description:Na+,K+-ATPase beta subunit
Chain IDs:B (auth: D), E (auth: B)
Chain Length:305
Number of Molecules:2
Biological Source:Squalus acanthias
Polymer Type:polypeptide(L)
Description:FXYD domain-containing ion transport regulator
Chain IDs:C (auth: E), F (auth: G)
Chain Length:94
Number of Molecules:2
Biological Source:Squalus acanthias
Primary Citation
Cryo-electron microscopy of Na + ,K + -ATPase reveals how the extracellular gate locks in the E2·2K + state.
Febs Lett. 596 2513 2524 (2022)
PMID: 35747985 DOI: 10.1002/1873-3468.14437

Abstact

Na+ ,K+ -ATPase (NKA) is one of the most important members of the P-type ion-translocating ATPases and plays a pivotal role in establishing electrochemical gradients for Na+ and K+ across the cell membrane. Presented here is a 3.3 Å resolution structure of NKA in the E2·2K+ state solved by cryo-electron microscopy. It is a stable state with two occluded K+ after transferring three Na+ into the extracellular medium and releasing inorganic phosphate bound to the cytoplasmic P domain. We describe how the extracellular ion pathway wide open in the E2P state becomes closed and locked in E2·2K+ , linked to events at the phosphorylation site more than 50 Å away. We also show, although at low resolution, how ATP binding to NKA in E2·2K+ relaxes the gating machinery and thereby accelerates the transition into the next step, that is, the release of K+ into the cytoplasm, more than 100 times.

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