7Y3F image
Deposition Date 2022-06-10
Release Date 2023-03-01
Last Version Date 2024-10-23
Entry Detail
PDB ID:
7Y3F
Keywords:
Title:
Structure of the Anabaena PSI-monomer-IsiA supercomplex
Biological Source:
Source Organism:
Nostoc sp. (Taxon ID: 1180)
Method Details:
Experimental Method:
Resolution:
2.62 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit XI
Gene (Uniprot):psaL
Chain IDs:L (auth: 1)
Chain Length:476
Number of Molecules:1
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:IsiA
Chain IDs:M (auth: 2), N (auth: 3), Q (auth: 6)
Chain Length:325
Number of Molecules:3
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:Iron stress-induced chlorophyll-binding protein
Gene (Uniprot):isiA
Chain IDs:O (auth: 4), P (auth: 5)
Chain Length:344
Number of Molecules:2
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyll a apoprotein A1
Gene (Uniprot):psaA
Chain IDs:A
Chain Length:752
Number of Molecules:1
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyll a apoprotein A2 1
Gene (Uniprot):psaB1
Chain IDs:B
Chain Length:741
Number of Molecules:1
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:Photosystem I iron-sulfur center
Gene (Uniprot):psaC
Chain IDs:C
Chain Length:81
Number of Molecules:1
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit II
Gene (Uniprot):psaD
Chain IDs:D
Chain Length:139
Number of Molecules:1
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit IV
Gene (Uniprot):psaE
Chain IDs:E
Chain Length:70
Number of Molecules:1
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit III
Gene (Uniprot):psaF
Chain IDs:F
Chain Length:164
Number of Molecules:1
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit VIII
Gene (Uniprot):psaI
Chain IDs:G (auth: I)
Chain Length:46
Number of Molecules:1
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit IX
Gene (Uniprot):psaJ
Chain IDs:H (auth: J)
Chain Length:49
Number of Molecules:1
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:Unknown
Chain IDs:I (auth: K)
Chain Length:82
Number of Molecules:1
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:PsaM
Chain IDs:J (auth: M)
Chain Length:40
Number of Molecules:1
Biological Source:Nostoc sp.
Polymer Type:polypeptide(L)
Molecule:Photosystem I 4.8 kDa protein
Gene (Uniprot):psaX
Chain IDs:K (auth: X)
Chain Length:44
Number of Molecules:1
Biological Source:Nostoc sp.
Primary Citation
Structure of a monomeric photosystem I core associated with iron-stress-induced-A proteins from Anabaena sp. PCC 7120.
Nat Commun 14 920 920 (2023)
PMID: 36805598 DOI: 10.1038/s41467-023-36504-1

Abstact

Iron-stress-induced-A proteins (IsiAs) are expressed in cyanobacteria under iron-deficient conditions. The cyanobacterium Anabaena sp. PCC 7120 has four isiA genes; however, their binding property and functional roles in PSI are still missing. We analyzed a cryo-electron microscopy structure of a PSI-IsiA supercomplex isolated from Anabaena grown under an iron-deficient condition. The PSI-IsiA structure contains six IsiA subunits associated with the PsaA side of a PSI core monomer. Three of the six IsiA subunits were identified as IsiA1 and IsiA2. The PSI-IsiA structure lacks a PsaL subunit; instead, a C-terminal domain of IsiA2 occupies the position of PsaL, which inhibits the oligomerization of PSI, leading to the formation of a PSI monomer. Furthermore, excitation-energy transfer from IsiAs to PSI appeared with a time constant of 55 ps. These findings provide insights into both the molecular assembly of the Anabaena IsiA family and the functional roles of IsiAs.

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