7Y3E image
Deposition Date 2022-06-10
Release Date 2023-08-09
Last Version Date 2025-07-02
Entry Detail
PDB ID:
7Y3E
Title:
Cryo-EM structure of Arabidopsis thaliana SOS1 in an occluded state
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sodium/hydrogen exchanger 7
Gene (Uniprot):NHX7
Chain IDs:A, B
Chain Length:1146
Number of Molecules:2
Biological Source:Arabidopsis thaliana
Ligand Molecules
Primary Citation
Architecture and autoinhibitory mechanism of the plasma membrane Na + /H + antiporter SOS1 in Arabidopsis.
Nat Commun 14 4487 4487 (2023)
PMID: 37495621 DOI: 10.1038/s41467-023-40215-y

Abstact

Salt-overly-sensitive 1 (SOS1) is a unique electroneutral Na+/H+ antiporter at the plasma membrane of higher plants and plays a central role in resisting salt stress. SOS1 is kept in a resting state with basal activity and activated upon phosphorylation. Here, we report the structures of SOS1. SOS1 forms a homodimer, with each monomer composed of transmembrane and intracellular domains. We find that SOS1 is locked in an occluded state by shifting of the lateral-gate TM5b toward the dimerization domain, thus shielding the Na+/H+ binding site. We speculate that the dimerization of the intracellular domain is crucial to stabilize the transporter in this specific conformation. Moreover, two discrete fragments and a residue W1013 are important to prevent the transition of SOS1 to an alternative conformational state, as validated by functional complementation assays. Our study enriches understanding of the alternate access model of eukaryotic Na+/H+ exchangers.

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Primary Citation of related structures
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