7Y1T image
Deposition Date 2022-06-08
Release Date 2022-08-31
Last Version Date 2024-11-13
Entry Detail
PDB ID:
7Y1T
Title:
Complex of integrin alphaV/beta8 and L-TGF-beta1 at a ratio of 1:2
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.24 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Integrin alpha-V
Gene (Uniprot):ITGAV
Mutagens:M401C
Chain IDs:A
Chain Length:635
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Integrin beta-8
Gene (Uniprot):ITGB8
Mutagens:V259C
Chain IDs:B
Chain Length:477
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Transforming growth factor beta-1 proprotein
Gene (Uniprot):TGFB1
Chain IDs:C (auth: D)
Chain Length:377
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Specificity of TGF-beta 1 signal designated by LRRC33 and integrin alpha V beta 8.
Nat Commun 13 4988 4988 (2022)
PMID: 36008481 DOI: 10.1038/s41467-022-32655-9

Abstact

Myeloid lineage cells present the latent form of transforming growth factor-β1 (L-TGF-β1) to the membrane using an anchor protein LRRC33. Integrin αVβ8 activates extracellular L-TGF-β1 to trigger the downstream signaling functions. However, the mechanism designating the specificity of TGF-β1 presentation and activation remains incompletely understood. Here, we report cryo-EM structures of human L-TGF-β1/LRRC33 and integrin αVβ8/L-TGF-β1 complexes. Combined with biochemical and cell-based analyses, we demonstrate that LRRC33 only presents L-TGF-β1 but not the -β2 or -β3 isoforms due to difference of key residues on the growth factor domains. Moreover, we reveal a 2:2 binding mode of integrin αVβ8 and L-TGF-β1, which shows higher avidity and more efficient L-TGF-β1 activation than previously reported 1:2 binding mode. We also uncover that the disulfide-linked loop of the integrin subunit β8 determines its exquisite affinity to L-TGF-β1. Together, our findings provide important insights into the specificity of TGF-β1 signaling achieved by LRRC33 and integrin αVβ8.

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Primary Citation of related structures