7XYG image
Deposition Date 2022-06-01
Release Date 2023-12-06
Last Version Date 2024-06-12
Entry Detail
PDB ID:
7XYG
Keywords:
DNA BINDING PROTEIN
Title:
Cryo-EM structure of Fft3-nucleosome complex with Fft3 bound to SHL+3 position of the nucleosome
Biological Source:
Source Organism:
Drosophila melanogaster (Taxon ID: 7227)
Schizosaccharomyces pombe 972h- (Taxon ID: 284812)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
4.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
7XYG validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H3
Gene (Uniprot):His3, His3:CG31613, His3:CG33803, His3:CG33806, His3:CG33809, His3:CG33812, His3:CG33815, His3:CG33818, His3:CG33821, His3:CG33824, His3:CG33827, His3:CG33830, His3:CG33833, His3:CG33836, His3:CG33839, His3:CG33842, His3:CG33845, His3:CG33848, His3:CG33851, His3:CG33854, His3:CG33857, His3:CG33860, His3:CG33863, His3:CG33866
Chain IDs:H (auth: A), I (auth: E)
Chain Length:135
Number of Molecules:2
Biological Source:Drosophila melanogaster
UniProt ID:P02299 Pfam ID:PF00125
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H4
Gene (Uniprot):His4, His4r, His4:CG31611, His4:CG33869, His4:CG33871, His4:CG33873, His4:CG33875, His4:CG33877, His4:CG33879, His4:CG33881, His4:CG33883, His4:CG33885, His4:CG33887, His4:CG33889, His4:CG33891, His4:CG33893, His4:CG33895, His4:CG33897, His4:CG33899, His4:CG33901, His4:CG33903, His4:CG33905, His4:CG33907, His4:CG33909
Chain IDs:J (auth: B), K (auth: F)
Chain Length:103
Number of Molecules:2
Biological Source:Drosophila melanogaster
UniProt ID:P84040 Pfam ID:PF15511
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H2A
Gene (Uniprot):His2A, His2A:CG31618, His2A:CG33808, His2A:CG33814, His2A:CG33817, His2A:CG33820, His2A:CG33823, His2A:CG33826, His2A:CG33829, His2A:CG33832, His2A:CG33835, His2A:CG33838, His2A:CG33841, His2A:CG33844, His2A:CG33847, His2A:CG33850, His2A:CG33862, His2A:CG33865
Chain IDs:A (auth: C), B (auth: G)
Chain Length:123
Number of Molecules:2
Biological Source:Drosophila melanogaster
UniProt ID:P84051 Pfam ID:PF16211, PF00125
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H2B
Gene (Uniprot):His2B, His2B:CG17949, His2B:CG33868, His2B:CG33870, His2B:CG33872, His2B:CG33874, His2B:CG33876, His2B:CG33878, His2B:CG33880, His2B:CG33882, His2B:CG33884, His2B:CG33886, His2B:CG33888, His2B:CG33890, His2B:CG33892, His2B:CG33894, His2B:CG33896, His2B:CG33898, His2B:CG33900, His2B:CG33902, His2B:CG33904, His2B:CG33906, His2B:CG33908, His2B:CG33910
Chain IDs:C (auth: D), D (auth: H)
Chain Length:123
Number of Molecules:2
Biological Source:Drosophila melanogaster
UniProt ID:P02283 Pfam ID:PF00125
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (167-MER)
Chain IDs:F (auth: I)
Chain Length:167
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (167-MER)
Chain IDs:E (auth: J)
Chain Length:167
Number of Molecules:1
Biological Source:synthetic construct
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ATP-dependent helicase fft3
Gene (Uniprot):fft3
Chain IDs:G (auth: K)
Chain Length:922
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe 972h-
UniProt ID:O42861 Pfam ID:PF00176, PF00271
Ligand Molecules
NA
Primary Citation
Cryo-EM structure of Fft3-nucleosome complex with Fft3 bound to SHL+3 position of the nucleosome (Class II Fft3-nucleosome complex)
To Be Published ? ? ? (?)
Primary Citation of related structures
7XYG
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