7XY7 image
Deposition Date 2022-05-31
Release Date 2023-05-03
Last Version Date 2025-07-02
Entry Detail
PDB ID:
7XY7
Title:
Adenosine receptor bound to a non-selective agonist in complex with a G protein obtained by cryo-EM
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.26 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(s) subunit alpha isoforms short
Gene (Uniprot):GNAS
Mutations:G49D,E50N,A249D,S252D,I372A,V375I,L272D
Chain IDs:A
Chain Length:243
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Gene (Uniprot):GNB1
Chain IDs:B
Chain Length:366
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Chain IDs:C (auth: G)
Chain Length:73
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Soluble cytochrome b562,Adenosine receptor A2b,LgBiT
Gene (Uniprot):cybC, ADORA2B
Mutations:M29W, H124I
Chain IDs:D (auth: R)
Chain Length:628
Number of Molecules:1
Biological Source:Escherichia coli, Homo sapiens, Oplophorus gracilirostris
Ligand Molecules
Primary Citation
Cryo-EM structure of the human adenosine A 2B receptor-G s signaling complex.
Sci Adv 8 eadd3709 eadd3709 (2022)
PMID: 36563137 DOI: 10.1126/sciadv.add3709

Abstact

The human adenosine A2B receptor (A2BR) is a class A G protein-coupled receptor that is involved in several major physiological and pathological processes throughout the body. A2BR recognizes its ligands adenosine and NECA with relatively low affinity, but the detailed mechanism for its ligand recognition and signaling is still elusive. Here, we present two structures determined by cryo-electron microscopy of A2BR bound to its agonists NECA and BAY60-6583, each coupled to an engineered Gs protein. The structures reveal conserved orthosteric binding pockets with subtle differences, whereas the selectivity or specificity can mainly be attributed to regions extended from the orthosteric pocket. We also found that BAY60-6583 occupies a secondary pocket, where residues V2506.51 and N2737.36 were two key determinants for its selectivity against A2BR. This study offers a better understanding of ligand selectivity for the adenosine receptor family and provides a structural template for further development of A2BR ligands for related diseases.

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Disease

Primary Citation of related structures