7XPC image
Deposition Date 2022-05-04
Release Date 2023-06-07
Last Version Date 2024-10-30
Entry Detail
PDB ID:
7XPC
Keywords:
IMMUNE SYSTEM
Title:
Complex structure of D-glycerate-3-kinase(GLYK) and AVRvnt1
Biological Source:
Source Organism:
Solanum lycopersicum (Taxon ID: 4081)
Phytophthora infestans T30-4 (Taxon ID: 403677)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
3.31 Å
R-Value Free:
0.31
R-Value Work:
0.29
R-Value Observed:
0.29
Space Group:
P 63
7XPC validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:D-glycerate-3-kinase (GLYK)
Chain IDs:A, C
Chain Length:337
Number of Molecules:2
Biological Source:Solanum lycopersicum
UniProt ID:A0A3Q7FWS2
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RxLR effector protein Avr-vnt11
Gene (Uniprot):Avr-vnt1
Chain IDs:B, D
Chain Length:84
Number of Molecules:2
Biological Source:Phytophthora infestans T30-4
UniProt ID:D0NTY1
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
NA
Primary Citation
Chloroplast Protein GLYK Hijacked by Phytophthora Infestans Effector AVRvnt1 in Cytoplasm to Activate NLR
To Be Published ? ? ? (?)
Primary Citation of related structures
7XPC