7XLQ image
Deposition Date 2022-04-22
Release Date 2023-02-08
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7XLQ
Title:
Structure of human R-type voltage-gated CaV2.3-alpha2/delta1-beta1 channel complex in the ligand-free (apo) state
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Voltage-dependent R-type calcium channel subunit alpha-1E
Gene (Uniprot):CACNA1E
Chain IDs:A
Chain Length:2313
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Voltage-dependent L-type calcium channel subunit beta-1
Gene (Uniprot):CACNB1
Chain IDs:C (auth: B)
Chain Length:598
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Voltage-dependent calcium channel subunit alpha-2/delta-1
Gene (Uniprot):CACNA2D1
Chain IDs:B (auth: D)
Chain Length:1077
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Molecular insights into the gating mechanisms of voltage-gated calcium channel Ca V 2.3.
Nat Commun 14 516 516 (2023)
PMID: 36720859 DOI: 10.1038/s41467-023-36260-2

Abstact

High-voltage-activated R-type CaV2.3 channel plays pivotal roles in many physiological activities and is implicated in epilepsy, convulsions, and other neurodevelopmental impairments. Here, we determine the high-resolution cryo-electron microscopy (cryo-EM) structure of human CaV2.3 in complex with the α2δ1 and β1 subunits. The VSDII is stabilized in the resting state. Electrophysiological experiments elucidate that the VSDII is not required for channel activation, whereas the other VSDs are essential for channel opening. The intracellular gate is blocked by the W-helix. A pre-W-helix adjacent to the W-helix can significantly regulate closed-state inactivation (CSI) by modulating the association and dissociation of the W-helix with the gate. Electrostatic interactions formed between the negatively charged domain on S6II, which is exclusively conserved in the CaV2 family, and nearby regions at the alpha-interacting domain (AID) and S4-S5II helix are identified. Further functional analyses indicate that these interactions are critical for the open-state inactivation (OSI) of CaV2 channels.

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