7XJI image
Deposition Date 2022-04-18
Release Date 2022-05-04
Last Version Date 2025-07-02
Entry Detail
PDB ID:
7XJI
Title:
Solabegron-activated dog beta3 adrenergic receptor
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Rattus norvegicus (Taxon ID: 10116)
unidentified (Taxon ID: 32644)
Canis lupus familiaris (Taxon ID: 9615)
Bos taurus (Taxon ID: 9913)
Method Details:
Experimental Method:
Resolution:
3.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(s) subunit alpha isoforms short
Gene (Uniprot):GNAS
Chain IDs:A
Chain Length:380
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Gene (Uniprot):Gnb1
Chain IDs:B
Chain Length:351
Number of Molecules:1
Biological Source:Rattus norvegicus
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
Gene (Uniprot):GNG2
Chain IDs:E (auth: G)
Chain Length:68
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:Nanobody-35
Chain IDs:C (auth: N)
Chain Length:137
Number of Molecules:1
Biological Source:unidentified
Polymer Type:polypeptide(L)
Molecule:Beta-3 adrenergic receptor
Gene (Uniprot):ADRB3
Chain IDs:D (auth: R)
Chain Length:395
Number of Molecules:1
Biological Source:Canis lupus familiaris
Ligand Molecules
Primary Citation
Cryo-EM structures of the beta 3 adrenergic receptor bound to solabegron and isoproterenol.
Biochem.Biophys.Res.Commun. 611 158 164 (2022)
PMID: 35489202 DOI: 10.1016/j.bbrc.2022.04.065

Abstact

The β3-adrenergic receptor (β3AR) is the most essential drug target for overactive bladder and has therapeutic potentials for the treatments of type 2 diabetes and obesity. Here, we report the cryo-electron microscopy structures of the β3AR-Gs signaling complexes with the selective agonist, solabegron and the nonselective agonist, isoproterenol. Comparison of the isoproterenol-, mirabegron-, and solabegron-bound β3AR structures revealed that the extracellular loop 2 changes its conformation depending on the bound agonist and plays an essential role in solabegron binding. Moreover, β3AR has an intrinsically narrow exosite, regardless of the agonist type. This structural feature clearly explains why β3AR prefers mirabegron and solabegron, as the narrow exosite is suitable for binding with agonists with elongated shapes. Our study deepens the understanding of the binding characteristics of β3AR agonists and may pave the way for developing β3AR-selective drugs.

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Primary Citation of related structures