7XEV image
Deposition Date 2022-03-31
Release Date 2022-08-17
Last Version Date 2025-07-02
Entry Detail
PDB ID:
7XEV
Title:
Structure of mTRPV2_2-APB
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.27 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Transient receptor potential cation channel subfamily V member 2
Gene (Uniprot):Trpv2
Chain IDs:A, B, C, D
Chain Length:756
Number of Molecules:4
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Structural mechanisms of TRPV2 modulation by endogenous and exogenous ligands.
Nat.Chem.Biol. 19 72 80 (2023)
PMID: 36163384 DOI: 10.1038/s41589-022-01139-8

Abstact

The transient receptor potential vanilloid 2 (TRPV2) ion channel is a polymodal receptor widely involved in many physiological and pathological processes. Despite many TRPV2 modulators being identified, whether and how TRPV2 is regulated by endogenous lipids remains elusive. Here, we report an endogenous cholesterol molecule inside the vanilloid binding pocket (VBP) of TRPV2, with a 'head down, tail up' configuration, resolved at 3.2 Å using cryo-EM. Cholesterol binding antagonizes ligand activation of TRPV2, which is removed from VBP by methyl-β-cyclodextrin (MβCD) as resolved at 2.9 Å. We also observed that estradiol (E2) potentiated TRPV2 activation by 2-aminoethoxydiphenyl borate (2-APB), a classic tool compound for TRP channels. Our cryo-EM structures (resolved at 2.8-3.3 Å) further suggest how E2 disturbed cholesterol binding and how 2-APB bound within the VBP with E2 or without both E2 and endogenous cholesterol, respectively. Therefore, our study has established the structural basis for ligand recognition of the inhibitory endogenous cholesterol and excitatory exogenous 2-APB in TRPV2.

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