7XC6 image
Deposition Date 2022-03-23
Release Date 2022-04-20
Last Version Date 2024-06-26
Entry Detail
PDB ID:
7XC6
Title:
Photobacterium phosphoreum fatty acid reductase complex LuxC-LuxE
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.79 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Long-chain acyl-protein thioester reductase
Gene (Uniprot):luxC
Chain IDs:B (auth: A), C (auth: B), D (auth: C), E (auth: D)
Chain Length:477
Number of Molecules:4
Biological Source:Photobacterium phosphoreum
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:LuxE
Gene (Uniprot):luxE
Chain IDs:A (auth: E)
Chain Length:373
Number of Molecules:1
Biological Source:Photobacterium phosphoreum
Ligand Molecules
Primary Citation
Cryo-EM structure of the fatty acid reductase LuxC-LuxE complex provides insights into bacterial bioluminescence.
J.Biol.Chem. 298 102006 102006 (2022)
PMID: 35504354 DOI: 10.1016/j.jbc.2022.102006

Abstact

The discovery of reduced flavin mononucleotide and fatty aldehydes as essential factors of light emission facilitated study of bacterial luminescence. Although the molecular mechanisms underlying bacterial luminescence have been studied for more than 60 years, the structure of the bacterial fatty acid reductase complex remains unclear. Here, we report the cryo-EM structure of the Photobacterium phosphoreum fatty acid reductase complex LuxC-LuxE to a resolution of 2.79 Å. We show that the active site Lys238/Arg355 pair of LuxE is >30 Å from the active site Cys296 of LuxC, implying that catalysis relies on a large conformational change. Furthermore, mutagenesis and biochemical experiments support that the L-shaped cleft inside LuxC plays an important role in substrate binding and reaction. We obtained a series of mutants with significantly improved activity as measured by in vitro bioluminescence assays and demonstrated that the double mutant W111A/F483K displayed the highest activity (370% of the WT). Our results indicated that the activity of LuxC significantly affects the bacterial bioluminescence reaction. Finally, we expressed this mutated lux operon in Escherichia coli but observed that the in vivo concentrations of ATP and NADPH limited the enzyme activity; thus, we conclude that the luminous intensity mainly depends on the level of metabolic energy.

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Primary Citation of related structures