7X7H image
Deposition Date 2022-03-09
Release Date 2023-03-15
Last Version Date 2024-05-29
Entry Detail
PDB ID:
7X7H
Title:
Crystal structure of Fructose regulator/Histidine phosphocarrier protein complex from Vibrio cholerae
Biological Source:
Source Organism:
Vibrio cholerae (Taxon ID: 666)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Catabolite repressor/activator
Chain IDs:A, C
Chain Length:326
Number of Molecules:2
Biological Source:Vibrio cholerae
Polymer Type:polypeptide(L)
Molecule:HPr family phosphocarrier protein
Chain IDs:B, D
Chain Length:91
Number of Molecules:2
Biological Source:Vibrio cholerae
Ligand Molecules
Primary Citation
HPr prevents FruR-mediated facilitation of RNA polymerase binding to the fru promoter in Vibrio cholerae.
Nucleic Acids Res. 51 5432 5448 (2023)
PMID: 36987873 DOI: 10.1093/nar/gkad220

Abstact

Phosphorylation state-dependent interactions of the phosphoenolpyruvate (PEP):carbohydrate phosphotransferase system (PTS) components with transcription factors play a key role in carbon catabolite repression (CCR) by glucose in bacteria. Glucose inhibits the PTS-dependent transport of fructose and is preferred over fructose in Vibrio cholerae, but the mechanism is unknown. We have recently shown that, contrary to Escherichia coli, the fructose-dependent transcriptional regulator FruR acts as an activator of the fru operon in V. cholerae and binding of the FruR-fructose 1-phosphate (F1P) complex to an operator facilitates RNA polymerase (RNAP) binding to the fru promoter. Here we show that, in the presence of glucose, dephosphorylated HPr, a general PTS component, binds to FruR. Whereas HPr does not affect DNA-binding affinity of FruR, regardless of the presence of F1P, it prevents the FruR-F1P complex from facilitating the binding of RNAP to the fru promoter. Structural and biochemical analyses of the FruR-HPr complex identify key residues responsible for the V. cholerae-specific FruR-HPr interaction not observed in E. coli. Finally, we reveal how the dephosphorylated HPr interacts with FruR in V. cholerae, whereas the phosphorylated HPr binds to CcpA, which is a global regulator of CCR in Bacillus subtilis and shows structural similarity to FruR.

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Primary Citation of related structures