7WZ3 image
Entry Detail
PDB ID:
7WZ3
EMDB ID:
Title:
Cryo-EM structure of human TRiC-tubulin-S1 state
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2022-02-16
Release Date:
2023-02-22
Method Details:
Experimental Method:
Resolution:
4.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:T-complex protein 1 subunit delta
Chain IDs:E (auth: D), F (auth: d)
Chain Length:539
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-complex protein 1 subunit epsilon
Chain IDs:G (auth: E), H (auth: e)
Chain Length:539
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-complex protein 1 subunit theta
Chain IDs:M (auth: Q), N (auth: q)
Chain Length:548
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-complex protein 1 subunit zeta
Chain IDs:O (auth: Z), P (auth: z)
Chain Length:531
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-complex protein 1 subunit alpha
Chain IDs:A (auth: a), B (auth: A)
Chain Length:556
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-complex protein 1 subunit beta
Chain IDs:C (auth: b), D (auth: B)
Chain Length:535
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-complex protein 1 subunit gamma
Chain IDs:I (auth: g), J (auth: G)
Chain Length:545
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:T-complex protein 1 subunit eta
Chain IDs:K (auth: h), L (auth: H)
Chain Length:543
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Pathway and mechanism of tubulin folding mediated by TRiC/CCT along its ATPase cycle revealed using cryo-EM.
Commun Biol 6 531 531 (2023)
PMID: 37193829 DOI: 10.1038/s42003-023-04915-x

Abstact

The eukaryotic chaperonin TRiC/CCT assists the folding of about 10% of cytosolic proteins through an ATP-driven conformational cycle, and the essential cytoskeleton protein tubulin is the obligate substrate of TRiC. Here, we present an ensemble of cryo-EM structures of endogenous human TRiC throughout its ATPase cycle, with three of them revealing endogenously engaged tubulin in different folding stages. The open-state TRiC-tubulin-S1 and -S2 maps show extra density corresponding to tubulin in the cis-ring chamber of TRiC. Our structural and XL-MS analyses suggest a gradual upward translocation and stabilization of tubulin within the TRiC chamber accompanying TRiC ring closure. In the closed TRiC-tubulin-S3 map, we capture a near-natively folded tubulin-with the tubulin engaging through its N and C domains mainly with the A and I domains of the CCT3/6/8 subunits through electrostatic and hydrophilic interactions. Moreover, we also show the potential role of TRiC C-terminal tails in substrate stabilization and folding. Our study delineates the pathway and molecular mechanism of TRiC-mediated folding of tubulin along the ATPase cycle of TRiC, and may also inform the design of therapeutic agents targeting TRiC-tubulin interactions.

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Primary Citation of related structures