7WR3 image
Entry Detail
PDB ID:
7WR3
Keywords:
Title:
Crystal structure of MBP-fused OspC3 in complex with calmodulin
Biological Source:
PDB Version:
Deposition Date:
2022-01-26
Release Date:
2023-01-25
Method Details:
Experimental Method:
Resolution:
1.87 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:MBP-fused OspC3
Chain IDs:A, B
Chain Length:806
Number of Molecules:2
Biological Source:Bolitoglossa, Shigella flexneri
Polymer Type:polypeptide(L)
Description:Calmodulin-1
Chain IDs:C, D
Chain Length:153
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Structural mechanisms of calmodulin activation of Shigella effector OspC3 to ADP-riboxanate caspase-4/11 and block pyroptosis.
Nat.Struct.Mol.Biol. 30 261 272 (2023)
PMID: 36624349 DOI: 10.1038/s41594-022-00888-3

Abstact

The caspase-4/11-GSDMD pyroptosis axis recognizes cytosolic lipopolysaccharide for antibacterial defenses. Shigella flexneri employs an OspC3 effector to block pyroptosis by catalyzing NAD+-dependent arginine ADP-riboxanation of caspase-4/11. Here, we identify Ca2+-free calmodulin (CaM) that binds and stimulates OspC3 ADP-riboxanase activity. Crystal structures of OspC3-CaM and OspC3-caspase-4 binary complexes reveal unique CaM binding to an OspC3 N-terminal domain featuring an ADP-ribosyltransferase-like fold and specific recognition of caspase-4 by an OspC3 ankryin repeat domain, respectively. CaM-OspC3-caspase-4 ternary complex structures show that NAD+ binding reorganizes the catalytic pocket, in which D231 and D177 activate the substrate arginine for initial ADP-ribosylation and ribosyl 2'-OH in the ADP-ribosylated arginine, respectively, for subsequent deamination. We also determine structures of unmodified and OspC3-ADP-riboxanated caspase-4. Mechanisms derived from this series of structures covering the entire process of OspC3 action are supported by biochemical analyses in vitro and functional validation in S. flexneri-infected mice.

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