7WM0 image
Deposition Date 2022-01-14
Release Date 2022-08-17
Last Version Date 2024-11-06
Entry Detail
PDB ID:
7WM0
Keywords:
VIRAL PROTEIN,IMMUNE SYSTEM
Title:
Cryo-EM structure of the Omicron RBD in complex with 35B5 Fab( local refinement of the RBD and 35B5 Fab)
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.35 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
7WM0 validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Chain IDs:A (auth: B)
Chain Length:1285
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTC2 Pfam ID:PF16451, PF09408, PF19209, PF01601
Polymer Type:polypeptide(L)
Molecule:Light chain of 35B5 Fab
Chain IDs:B (auth: H)
Chain Length:237
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Heavy chain of 35B5 Fab
Chain IDs:C (auth: L)
Chain Length:219
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
NAG
Primary Citation
35B5 antibody potently neutralizes SARS-CoV-2 Omicron by disrupting the N-glycan switch via a conserved spike epitope
Cell Host Microbe 30 887 ? (2022)
DOI: 10.1016/j.chom.2022.03.035
Primary Citation of related structures
7WM0