7WKH image
Deposition Date 2022-01-09
Release Date 2022-02-02
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7WKH
Keywords:
Title:
the grass carp IFNa
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.58 Å
R-Value Free:
0.22
R-Value Work:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Interferon
Gene (Uniprot):IFN
Chain IDs:A
Chain Length:160
Number of Molecules:1
Biological Source:Ctenopharyngodon idella
Primary Citation
Structural and Functional Analyses of Type I IFNa Shed Light Into Its Interaction With Multiple Receptors in Fish.
Front Immunol 13 862764 862764 (2022)
PMID: 35392096 DOI: 10.3389/fimmu.2022.862764

Abstact

Teleost type I interferons (IFNs) are categorized into group I and II subgroups that bind to distinct receptors to activate antiviral responses. However, the interaction between ifn ligands and receptors has not fully been understood. In this study, the crystal structure of grass carp [Ctenopharyngodon idella (Ci)] IFNa has been solved at 1.58Å and consists of six helices. The CiIFNa displays a typical structure of type I IFNs with a straight helix F and lacks a helix element in the AB loop. Superposition modeling identified several key residues involved in the interaction with receptors. It was found that CiIFNa bound to cytokine receptor family B (CRFB) 1, CRFB2, and CRFB5, and the three receptors could form heterodimeric receptor complexes. Furthermore, mutation of Leu27, Glu103, Lys117, and His165 markedly decreased the phosphorylation of signal transducer and activator of transcription (STAT) 1a induced by CiIFNa in the Epithelioma papulosum cyprini (EPC) cells, and Glu103 was shown to be required for the CiIFNa-activated antiviral activity. Interestingly, wild-type and mutant CiIFNa proteins did not alter the phosphorylation levels of STAT1b. Our results demonstrate that fish type I IFNs, although structurally conserved, interact with the receptors in a manner that may differ from mammalian homologs.

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