7WKC image
Deposition Date 2022-01-08
Release Date 2022-02-16
Last Version Date 2024-05-15
Entry Detail
PDB ID:
7WKC
Title:
A prototype protein nanocage minimized from carboxysomes with gated oxygen permeability
Biological Source:
Method Details:
Experimental Method:
Conformers Calculated:
500
Conformers Submitted:
5
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Carboxysome shell vertex protein CcmL
Gene (Uniprot):ccmL
Chain IDs:A, B, C, D, E
Chain Length:104
Number of Molecules:5
Biological Source:Thermosynechococcus vestitus BP-1
Ligand Molecules
Primary Citation
A prototype protein nanocage minimized from carboxysomes with gated oxygen permeability.
Proc.Natl.Acad.Sci.USA 119 ? ? (2022)
PMID: 35078933 DOI: 10.1073/pnas.2104964119

Abstact

Protein nanocages (PNCs) in cells and viruses have inspired the development of self-assembling protein nanomaterials for various purposes. Despite the successful creation of artificial PNCs, the de novo design of PNCs with defined permeability remains challenging. Here, we report a prototype oxygen-impermeable PNC (OIPNC) assembled from the vertex protein of the β-carboxysome shell, CcmL, with quantum dots as the template via interfacial engineering. The structure of the cage was solved at the atomic scale by combined solid-state NMR spectroscopy and cryoelectron microscopy, showing icosahedral assembly of CcmL pentamers with highly conserved interpentamer interfaces. Moreover, a gating mechanism was established by reversibly blocking the pores of the cage with molecular patches. Thus, the oxygen permeability, which was probed by an oxygen sensor inside the cage, can be completely controlled. The CcmL OIPNC represents a PNC platform for oxygen-sensitive or oxygen-responsive storage, catalysis, delivery, sensing, etc.

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Primary Citation of related structures