7WIJ image
Deposition Date 2022-01-03
Release Date 2022-06-22
Last Version Date 2024-06-26
Entry Detail
PDB ID:
7WIJ
Keywords:
Title:
Cryo-EM structure of prenyltransferase domain of Macrophoma phaseolina macrophomene synthase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.17 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Geranylgeranyl diphosphate synthase
Gene (Uniprot):MPH_02178
Chain IDs:A, B, C, D, E, F
Chain Length:718
Number of Molecules:6
Biological Source:Macrophomina phaseolina MS6
Ligand Molecules
Primary Citation

Abstact

All known triterpenes are generated by triterpene synthases (TrTSs) from squalene or oxidosqualene1. This approach is fundamentally different from the biosynthesis of short-chain (C10-C25) terpenes that are formed from polyisoprenyl diphosphates2-4. In this study, two fungal chimeric class I TrTSs, Talaromyces verruculosus talaropentaene synthase (TvTS) and Macrophomina phaseolina macrophomene synthase (MpMS), were characterized. Both enzymes use dimethylallyl diphosphate and isopentenyl diphosphate or hexaprenyl diphosphate as substrates, representing the first examples, to our knowledge, of non-squalene-dependent triterpene biosynthesis. The cyclization mechanisms of TvTS and MpMS and the absolute configurations of their products were investigated in isotopic labelling experiments. Structural analyses of the terpene cyclase domain of TvTS and full-length MpMS provide detailed insights into their catalytic mechanisms. An AlphaFold2-based screening platform was developed to mine a third TrTS, Colletotrichum gloeosporioides colleterpenol synthase (CgCS). Our findings identify a new enzymatic mechanism for the biosynthesis of triterpenes and enhance understanding of terpene biosynthesis in nature.

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Primary Citation of related structures