7WFG image
Entry Detail
PDB ID:
7WFG
EMDB ID:
Title:
Subcomplexes A and E in NDH complex from Arabidopsis
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2021-12-26
Release Date:
2022-03-16
Method Details:
Experimental Method:
Resolution:
4.33 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Chain IDs:A (auth: H)
Chain Length:393
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:NAD(P)H-quinone oxidoreductase subunit I, chloroplastic
Chain IDs:B (auth: I)
Chain Length:172
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Chain IDs:C (auth: J)
Chain Length:158
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:NAD(P)H-quinone oxidoreductase subunit K, chloroplastic
Chain IDs:D (auth: K)
Chain Length:225
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:NAD(P)H-quinone oxidoreductase subunit L, chloroplastic
Chain IDs:E (auth: L)
Chain Length:191
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:NAD(P)H-quinone oxidoreductase subunit M, chloroplastic
Chain IDs:F (auth: M)
Chain Length:217
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:NAD(P)H-quinone oxidoreductase subunit N, chloroplastic
Chain IDs:G (auth: N)
Chain Length:209
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:NdhO
Chain IDs:H (auth: O)
Chain Length:158
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Polymer Type:polypeptide(L)
Description:NdhT
Chain IDs:I (auth: T)
Chain Length:122
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Ligand Molecules
Primary Citation
Supramolecular assembly of chloroplast NADH dehydrogenase-like complex with photosystem I from Arabidopsis thaliana.
Mol Plant 15 454 467 (2022)
PMID: 35123031 DOI: 10.1016/j.molp.2022.01.020

Abstact

Cyclic electron transport/flow (CET/CEF) in chloroplasts is a regulatory process essential for the optimization of plant photosynthetic efficiency. A crucial CEF pathway is catalyzed by a membrane-embedded NADH dehydrogenase-like (NDH) complex that contains at least 29 protein subunits and associates with photosystem I (PSI) to form the NDH-PSI supercomplex. Here, we report the 3.9 Å resolution structure of the Arabidopsis thaliana NDH-PSI (AtNDH-PSI) supercomplex. We constructed structural models for 26 AtNDH subunits, among which 11 are unique to chloroplasts and stabilize the core part of the NDH complex. In the supercomplex, one NDH can bind up to two PSI-light-harvesting complex I (PSI-LHCI) complexes at both sides of its membrane arm. Two minor LHCIs, Lhca5 and Lhca6, each present in one PSI-LHCI, interact with NDH and contribute to supercomplex formation and stabilization. Collectively, our study reveals the structural details of the AtNDH-PSI supercomplex assembly and provides a molecular basis for further investigation of the regulatory mechanism of CEF in plants.

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Primary Citation of related structures