7W5R image
Entry Detail
PDB ID:
7W5R
Title:
KRAS G12V and peptide complex
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2021-11-30
Release Date:
2022-12-07
Method Details:
Experimental Method:
Resolution:
3.87 Å
R-Value Free:
0.31
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Isoform 2B of GTPase KRas
Mutations:G12V
Chain IDs:A, B (auth: E), D (auth: I), E (auth: M), F (auth: Q), G (auth: U)
Chain Length:174
Number of Molecules:6
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:LEU-TYR-ASP-VAL-ALA
Chain IDs:C (auth: H), H (auth: X)
Chain Length:5
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Structural basis of the oncogenic KRAS mutant and GJ101 complex.
Biochem.Biophys.Res.Commun. 641 27 33 (2023)
PMID: 36516586 DOI: 10.1016/j.bbrc.2022.12.019

Abstact

KRAS mutations occur in a quarter of all human cancers. When activated in its GTP-bound form, RAS stimulates diverse cellular systems, such as cell division, differentiation, growth, and apoptosis through the activations of various signaling pathways, which include mitogen-activated protein kinase (MAPK), phosphoinositide 3 kinases (PI3K), and RAL-GEFs pathways. We found that GJ101 (65LYDVA69) binds directly to the KRAS mutant (G12V) and showed tumor-suppressive activity. In addition, the GJ101 peptide inhibited KRAS mutant as determined by a [α-32P] guanosine triphosphate (GTP) binding assay and suppressed pancreatic cell line in a cell proliferation assay. Herein, the complex structure of KRAS and GJ101 was clarified by X-ray crystallography. Isothermal titration calorimetry showed that GJ101 binds highly with KRAS mutant and the complex structure of KRAS G12V.GJ101 complex presented that the residue of Q61 directly interacted with L65 of GJ101. Overall, the results suggest GJ101 be considered a developmental starting point for KRAS G12V inhibitor.

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